Minced

Description

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MinCED is a program to find Clustered Regularly Interspaced Short Palindromic Repeats (CRISPRs) in full genomes or environmental datasets such as metagenomes, in which sequence size can be anywhere from 100 to 800 bp.

Environment Modules

Run module spider minced to find out what environment modules are available for this application.

Environment Variables

• HPC_MINCED_DIR - installation directory
• HPC_MINCED_BIN - executable directory
• HPC_MINCED_DOC - documentation directory
• HPC_MINCED_EXE - examples directory

Categories

biology, genomics