MicrobeAnnotator¶
Description¶
Easy-to-use pipeline for the comprehensive metabolic annotation of microbial genomes.
Environment Modules¶
Run module spider microbeannotator to find out what environment modules are available for this application.
Environment Variables¶
- HPC_MICROBEANNOTATOR_DIR - installation directory
- HPC_MICROBEANNOTATOR_BIN - executable directory
- HPC_MICROBEANNOTATOR_REF - reference database
Citation¶
If you publish research that uses microbeannotator you have to cite it as follows:
Ruiz-Perez, A., Valenzuela-Gutierrez, M., Fonseca-Salmoral, M., & Coelho, L. P. (2020). MicrobeAnnotator: A user-friendly, comprehensive functional annotation pipeline for microbial genomes. BMC Bioinformatics, 21, 178. https://doi.org/10.1186/s12859-020-03940-5
Categories¶
annotation, biology