micop¶
Description¶
MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.
Environment Modules¶
Run module spider micop to find out what environment modules are available for this application.
Environment Variables¶
- HPC_MICOP_DIR - installation directory
- HPC_MICOP_BIN - executable directory
Citation¶
If you publish research that uses micop you have to cite it as follows:
LaPierre, N., Mangul, S., Alser, M., Mandric, I., Wu, N. C., Koslicki, D., & Eskin, E. (2019). MiCoP: Microbial community profiling method for detecting viral and fungal organisms in metagenomic samples. BMC Genomics, 20(Suppl 5), 423. https://doi.org/10.1186/s12864-019-5699-9
Categories¶
genomics