MetaPhlAn2

Description

metaphlan2 website

MetaPhlAn2 is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data. MetaPhlAn relies on unique clade-specific marker genes identified from 3,000 reference genomes.

Environment Modules

Run module spider metaphlan2 to find out what environment modules are available for this application.

Environment Variables

• HPC_METAPHLAN2_DIR - installation directory
• HPC_METAPHLAN2_BIN - executable directory
• HPC_METAPHLAN2_DOC - documentation directory
• HPC_METAPHLAN2_EXE - examples directory

Categories

biology, phylogenetics