MetaCompare¶
Description¶
MetaCompare is a computational pipeline for prioritizing resistome risk by estimating the potential for ARGs to be disseminated into human pathogens from a given environmental sample based on metagenomic sequencing data.
Environment Modules¶
Run module spider metacompare to find out what environment modules are available for this application.
Environment Variables¶
- HPC_METACOMPARE_DIR - installation directory
- HPC_METACOMPARE_BIN - executable directory
- HPC_METACOMPARE_DB - blast database directory
Citation¶
If you publish research that uses metacompare you have to cite it as follows:
Categories¶
phylogenetics