MaSuRCA¶

Description¶

MaSuRCA is whole genome assembly software. It combines the efficiency of the de Bruijn graph and Overlap-Layout-Consensus (OLC) approaches. MaSuRCA can assemble data sets containing only short reads from Illumina sequencing or a mixture of short reads and long reads (Sanger, 454).

Environment Modules¶

Run module spider masurca to find out what environment modules are available for this application.

Environment Variables¶

HPC_MASURCA_DIR - installation directory
HPC_MASURCA_BIN - executable directory
HPC_MASURCA_NET - network file directory

Categories¶

biology, alignment