Lighter

Description

lighter website

Lighter is a kmer-based error correction method for whole genome sequencing data. Lighter uses sampling (rather than counting) to obtain a set of kmers that are likely from the genome. Using this information, Lighter can correct the reads containing sequence errors.

Environment Modules

Run module spider lighter to find out what environment modules are available for this application.

Environment Variables

• HPC_LIGHTER_DIR - installation directory
• HPC_LIGHTER_BIN - executable directory

Categories

genome