ITK-SNAP

Description

itksnap website

SNAP is a software application used to segment structures in 3D medical images. It provides semi-automatic segmentation using active contour methods, as well as manual delineation and image navigation. In addition to these core functions, SNAP provides a number of supporting utilities.

Environment Modules

Run module spider itksnap to find out what environment modules are available for this application.

Environment Variables

• HPC_ITKSNAP_DIR - installation directory
• HPC_ITKSNAP_BIN - executable directory

Categories

biology, neuroscience, imaging