Citation

If you publish research that uses illumiprocessor you have to cite it as follows:

Faircloth, BC. 2013. illumiprocessor: a trimmomatic wrapper for parallel adapter and quality trimming. http://doi.org/10.6079/J9ILL.

If you use trimmomatic, please be sure to also cite:

Bolger, A. M., Lohse, M., & Usadel, B. (2014). Trimmomatic: A flexible trimmer for Illumina Sequence Data. Bioinformatics. http://doi.org/10.1093/bioinformatics/btu170.