iAssembler¶
Description¶
iAssembler is a standalone package to assemble ESTs generated using Sanger and/or Roche-454 pyrosequencing technologies into contigs. The pipeline gives much higher accuracy in EST assembly than other existing assemblers by employing an iterative assembly strategy and automated error corrections of mis-assemblies.
Environment Modules¶
Run module spider iassembler to find out what environment modules are available for this application.
Environment Variables¶
- HPC_IASSEMLBER_DIR - installation directory
- HPC_IASSEMLBER_BIN - executable directory
- HPC_IASSEMLBER_DOC - documentation directory
Citation¶
If you publish research that uses iassembler you have to cite it as follows:
Categories¶
biology, assembly