HoCoRT¶

Description¶

HoCoRT is a highly optimized and parallelized pipeline for RNA-Seq trimming and quality control, designed for use in high-performance computing environments.

Environment Modules¶

Run module spider hocort to find out what environment modules are available for this application.

Environment Variables¶

HPC_HOCORT_DIR - installation directory
HPC_HOCORT_BIN - executable directory

Categories¶

RNA-Seq, QC