HLAminer

Description

hlaminer website

HLA predictions from NGS shotgun data

Environment Modules

Run module spider hlaminer to find out what environment modules are available for this application.

Environment Variables

• HPC_HLAMINER_DIR - installation directory
• HPC_HLAMINER_BIN - executable directory
• HPC_HLAMINER_DOC - documentation directory
• HPC_HLAMINER_EXE - examples directory
• HPC_HLAMINER_DBD - examples directory

Citation

If you publish research that uses hlaminer you have to cite it as follows:

Warren RL, Choe G, Freeman DJ, Castellarin M, Munro S, Moore R, Holt RA. 2012. Derivation of HLA types from shotgun sequence datasets. Genome Med. 4:95

Categories

biology, phylogenetics