HiMT

Description

himt website

HiMT is a rapid organelle genome assembly tool for HiFi data, which can be used for the assembly of plant mitochondrial, chloroplast, and animal mitochondrial genomes. It supports usage on Linux, Windows, and macOS, and can be used through both command line and GUI.

Environment Modules

Run module spider himt to find out what environment modules are available for this application.

Environment Variables

• HPC_HIMT_DIR - installation directory
• HPC_HIMT_BIN - executable directory

Categories

biology, genomics