Gubbins¶
Description¶
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Environment Modules¶
Run module spider gubbins to find out what environment modules are available for this application.
Environment Variables¶
- HPC_GUBBINS_DIR - installation directory
- HPC_GUBBINS_BIN - executable directory
Citation¶
If you publish research that uses gubbins you have to cite it as follows:
Croucher N. J., Page A. J., Connor T. R., Delaney A. J., Keane J. A., Bentley S. D., Parkhill J., Harris S.R. "Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins". doi:10.1093/nar/gku1196, Nucleic Acids Research, 2014.
Categories¶
phylogenetics