GROCSVs¶

Description¶

Genome-wide Reconstruction of Complex Structural Variants, or GROC-SVs, is a software pipeline for identifying large-scale structural variants, performing sequence assembly at the breakpoints, and reconstructing the complex structural variants using the long-fragment information from the 10x Genomics platform.

Environment Modules¶

Run module spider grocsvs to find out what environment modules are available for this application.

Environment Variables¶

HPC_GROCSVS_DIR - installation directory
HPC_GROCSVS_BIN - executable directory

Categories¶

phylogenetics