graphaligner¶

Description¶

Seed-and-extend program for aligning long error-prone reads to genome graphs.

Run module spider graphaligner to find out what environment modules are available for this application.

If you publish research that uses graphaligner you have to cite it as follows:

Rautiainen, M., Marschall, T. GraphAligner: rapid and versatile sequence-to-graph alignment. Genome Biol 21, 253 (2020). https://doi.org/10.1186/s13059-020-02157-2

genomics