GFF-Ex¶

Description¶

GFF-Ex (gffex) is a Genome Feature extraction package which extracts Gene, Exon, Intron, Upstream Region of Gene (Promoters), Intergenic and CDS/cDNA sequences by just tweeting in the Genome Feature File (gff,gtf) along with the corresponding genome/chromosome.

Environment Modules¶

Run module spider gff-ex to find out what environment modules are available for this application.

Environment Variables¶

HPC_GFFEX_DIR - installation directory
HPC_GFFEX_BIN - executable directory

Categories¶

phylogenetics