gfastats

Description

gfastats website

gfastats is a single fast and exhaustive tool for summary statistics and simultaneous fa (fasta, fastq, gfa [.gz]) genome assembly file manipulation. gfastats also allows seamless fasta<>fastq<>gfa[.gz] conversion. It has been tested in genomes even >100Gbp.

Environment Modules

Run module spider gfastats to find out what environment modules are available for this application.

Environment Variables

• HPC_GFASTATS_DIR - installation directory
• HPC_GFASTATS_BIN - executable directory

Categories

biology, genomics