GFam¶

Description¶

GFam is a command-line tool for automatic annotation of gene families. GFam offers a framework for complete genome initiatives and model organism resources to build domain-based gene families, derive meaningful functional labels and maintain family annotation across genome releases seamlessly. Our approach achieves a unified system for grouping proteins based on evolutionary and functional relationships.

Environment Modules¶

Run module spider gfam to find out what environment modules are available for this application.

Environment Variables¶

HPC_GFAM_DIR - installation directory
HPC_GFAM_BIN - executable directory

Categories¶

biology, genomics, annotation