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GenotypeHarmonizer

Description

genotypeharmonizer website

The Genotype Harmonizer is an easy to use command-line tool that allows harmonization of genotype data stored using different file formats with different and potentially unknown strands. Note: export _JAVA_OPTIONS="-Xmx?g" where ? equals to the available memory.

Environment Modules

Run module spider genotypeharmonizer to find out what environment modules are available for this application.

Environment Variables

  • HPC_GENOTYPEHARMONIZER_DIR - installation directory
  • HPC_GENOTYPEHARMONIZER_BIN - executable directory
  • HPC_GENOTYPEHARMONIZER_DOC - documentation directory
  • HPC_GENOTYPEHARMONIZER_EXE - example directory

Citation

If you publish research that uses GenotypeHarmonizer you have to cite it as follows:

https://bmcresnotes.biomedcentral.com/articles/10.1186/1756-0500-7-901

Categories

biology