genesum

Description

genesum website

This is a tool to create gene-level summaries of transcript expression estimates. You provide the tool with an annotation file (in GTF/GFF format) and a set of transcript-level estimates, and it aggregates these expression estimates to the gene-level.

Environment Modules

Run module spider genesum to find out what environment modules are available for this application.

Environment Variables

• HPC_GENESUM_DIR - installation directory
• HPC_GENESUM_BIN - executable directory

Categories

biology, genomics