GCTA¶
Description¶
GCTA (Genome-wide Complex Trait Analysis) was originally designed to estimate the proportion of phenotypic variance explained by genome- or chromosome-wide SNPs for complex traits (the GREML method), and has subsequently extended for many other analyses to better understand the genetic architecture of complex traits.
Environment Modules¶
Run module spider gcta to find out what environment modules are available for this application.
Environment Variables¶
- HPC_GCTA_DIR - installation directory
- HPC_GCTA_BIN - executable directory
- HPC_GCTA_EXE - tests directory
Citation¶
If you publish research that uses gcta you have to cite it as follows:
Full list of citations covering the methods used by the software is available from the project website.
Categories¶
biology, genomics, variant_calling