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fslmrs

Description

fslmrs website

FSL-MRS is a python-based command-line software tool for the fitting and quantification of proton magnetic resonance spectroscopy data. FSL-MRS handles both single voxel and multi-voxel (MRSI) datasets. FSL-MRS is part of FSL (FMRIB Software Library).

Environment Modules

Run module spider fslmrs to find out what environment modules are available for this application.

Environment Variables

  • HPC_FSLMRS_DIR - installation directory
  • HPC_FSLMRS_BIN - executable directory

Citation

If you publish research that uses FSL-MRS you have to cite it as follows:

Clarke, W. T., Stagg, C. J., & Jbabdi, S. (2021). FSL-MRS: An end-to-end spectroscopy analysis package. Magnetic Resonance in Medicine, 85(6), 2950–2964. https://doi.org/10.1002/mrm.28630

Categories

spectroscopy, metabolomics