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FRAPOSA

Description

fraposa website

FRAPOSA (Fast and Robutst Ancestry Prediction by using Online singular value decomposition and Shrinkage Adjustment) predicts the ancestry of study samples by using principle component analysis (PCA) with a reference panel. The software accompanies this paper. For any questions, please contact daiweiz at umich dot edu.

Environment Modules

Run module spider fraposa to find out what environment modules are available for this application.

Environment Variables

  • HPC_FRAPOSA_DIR - installation directory
  • HPC_FRAPOSA_BIN - executable directory

Citation

If you publish research that uses fraposa you have to cite it as follows:

https://doi.org/10.1093/bioinformatics/btaa152

Categories

phylogenetics