BIRDS

Description

fiji-birds website

BIRDS（Bi-channel Image Registration and Deep-learning Segmentation for efficient, versatile mapping of mouse brain）is an open source automation pipeline suitable for brain data from different microscopy platforms.

Environment Modules

Run module spider fiji-birds to find out what environment modules are available for this application.

Environment Variables

• HPC_BIRDS_DIR - installation directory
• HPC_BIRDS_BIN - executable directory

Categories

workflow_automation, utility, imaging