FastqPuri¶

Description¶

Software and source code of FastqPuri. It creates quality reports of fastq files and filters them removing low quality reads, reads containing too many N's or contamination reads (unwanted rRNA reads, impurities coming from another organism.

Environment Modules¶

Run module spider fastqpuri to find out what environment modules are available for this application.

Environment Variables¶

HPC_FASTQPURI_DIR - installation directory
HPC_FASTQPURI_BIN - executable directory

Categories¶

phylogenetics