emu

Description

emu website

Emu is a relative abundance estimator for 16S genomic sequences. The method is optimized for error-prone full-length reads, but can also be utilized for short-read data. * EMU_DATABASE_DIR - database directory * RDB_PREBUILT_DB - rdb prebuilt database * SILVA_PREBUILT_DB - silva prebuilt database * UNITE_FUNGI_PREBUILT_DB - unite-fungi prebuilt database * UNITE_ALL_PREBUILT_DB - unite-all prebuilt database

Environment Modules

Run module spider emu to find out what environment modules are available for this application.

Environment Variables

• HPC_EMU_DIR - installation directory
• HPC_EMU_BIN - executable directory

Categories

phylogenetics