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eagle-rc

Description

eagle-rc website

Requires: htslib (http://www.htslib.org/). Set HTSDIR in the make file to the htslib folder and make. Note that we merely call make on htslib, as such, its dependencies and system requirements need to be fulfilled.

Environment Modules

Run module spider eagle-rc to find out what environment modules are available for this application.

Environment Variables

  • HPC_EAGLERC_DIR - installation directory
  • HPC_EAGLERC_BIN - executable directory
  • HPC_EAGLERC_SCP - scripts directory

Citation

If you publish research that uses eaglerc you have to cite it as follows:

Tony Kuo and Martin C Frith and Jun Sese and Paul Horton. EAGLE: Explicit Alternative Genome Likelihood Evaluator. BMC Medical Genomics. 11(Suppl 2):28.

Categories

phylogenetics