eagle-rc¶

Description¶

EAGLE is a C based tool for evaluating whether sequencing reads support one genomic hypothesis versus another by computing probabilistic likelihoods under each hypothesis.

Environment Modules¶

Run module spider eagle-rc to find out what environment modules are available for this application.

Environment Variables¶

HPC_EAGLERC_DIR - installation directory
HPC_EAGLERC_BIN - executable directory
HPC_EAGLERC_SCP - scripts directory

Citation¶

If you publish research that uses eaglerc you have to cite it as follows:

Kuo, T., Frith, M.C., Sese, J. et al. EAGLE: Explicit Alternative Genome Likelihood Evaluator. BMC Med Genomics 11 (Suppl 2), 28 (2018). https://doi.org/10.1186/s12920-018-0342-1

Categories¶

phylogenetics