dtiprep¶

Description¶

DTIPrep performs a "Study-specific Protocol" based automatic pipeline for DWI/DTI quality control and preparation. This is both a GUI and command line tool. The configurable pipeline includes image/diffusion information check, padding/Cropping of data, slice-wise, interlace-wise and gradient-wise intensity and motion check, head motion and Eddy current artifact correction, and DTI computing.

Environment Modules¶

Run module spider dtiprep to find out what environment modules are available for this application.

Environment Variables¶

HPC_DTIPREP_DIR - installation directory
HPC_DTIPREP_BIN - executable directory
HPC_DTIPREP_DOC - documentation directory
HPC_DTIPREP_EXE - examples directory

Categories¶

phylogenetics