dram¶

Description¶

DRAM (Distilled and Refined Annotation of Metabolism) is a tool for annotating metagenomic assembled genomes and VirSorter identified viral contigs. DRAM annotates MAGs and viral contigs using KEGG (if provided by the user), UniRef90, PFAM, dbCAN, RefSeq viral, VOGDB and the MEROPS peptidase database as well as custom user databases.

Environment Modules¶

Run module spider dram to find out what environment modules are available for this application.

Environment Variables¶

HPC_DRAM_DIR - installation directory
HPC_DRAM_BIN - executable directory
HPC_DRAM_REF - reference database directory

Citation¶

If you publish research that uses dram you have to cite it as follows:

Nucleic Acids Research, Volume 48, Issue 16, 18 September 2020, Pages 8883–8900, https://doi.org/10.1093/nar/gkaa621

Categories¶

biology, genomics, annotation