DeTiN¶

Description¶

DeTiN is designed to measure tumor-in-normal contamination and improve somatic variant detection sensitivity when using a contaminated matched control. Modules system sets up the following environment variables for this module:

Environment Modules¶

Run module spider detin to find out what environment modules are available for this application.

Environment Variables¶

HPC_DETIN_DIR - installation directory
HPC_DETIN_BIN - executable directory

Categories¶

imaging, ngs, genomics