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deepvariant

Description

deepvariant website

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data. This module sets the following environment variables:

Environment Modules

Run module spider deepvariant to find out what environment modules are available for this application.

Environment Variables

  • HPC_DEEPVARIANT_IMAGE - path to deepvariant container image

Categories

biology, genomics, sequencing, machine_learning