dapars¶
Description¶
DaPars(Dynamic analysis of Alternative PolyAdenylation from RNA-seq)
Environment Modules¶
Run module spider dapars
to find out what environment modules are available for this application.
Environment Variables¶
- HPC_DAPARS_DIR - installation directory
- HPC_DAPARS_BIN - executable directory
Citation¶
If you publish research that uses dapars you have to cite it as follows:
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Xia, Z., Donehower, L. A., Wheeler, D. A., Cooper, T. A., Neilson, J. R., Wagner, E. J., & Li, W. (2014). Dynamic analyses of alternative polyadenylation from RNA-seq reveal 3′-UTR landscape across 7 tumor types. Nature Communications, 5, 5274. https://doi.org/10.1038/ncomms6274
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Masamha, C. P., Xia, Z., Yang, J., Albrecht, T. R., Li, M., Shyu, A., Li, W., & Wagner, E. J. (2014). CFIm25 links alternative polyadenylation to glioblastoma tumor suppression. Nature, 510(7505), 412–416. https://doi.org/10.1038/nature13261
Categories¶
genomics, biology