CViT¶

Description¶

ViT is a Perl script used to quickly generate images that show features on genomic sequence. It is intentionally simplistic and low-tech; there are limitless possibilities for how one might view such data and CViT is optimized for speed and ease of use over high-tech features.

Environment Modules¶

Run module spider cvit to find out what environment modules are available for this application.

Environment Variables¶

HPC_CVIT_DIR - installation directory
HPC_CVIT_BIN - executable director

Citation¶

If you publish research that uses CViT you have to cite it as follows:

Chromosome Visualization Tool: A Whole Genome Viewer

Categories¶

programming, library