CViT

Description

cvit website

ViT is a Perl script used to quickly generate images that show features on genomic sequence. It is intentionally simplistic and low-tech; there are limitless possibilities for how one might view such data and CViT is optimized for speed and ease of use over high-tech features.

Environment Modules

Run module spider cvit to find out what environment modules are available for this application.

Environment Variables

• HPC_CVIT_DIR - installation directory
• HPC_CVIT_BIN - executable director

Citation

If you publish research that uses CViT you have to cite it as follows:

Ritchie, G. R. S., Flicek, P., & Cunningham, F. (2011). Chromosome Visualization Tool: A whole genome viewer. International Journal of Plant Genomics, 2011, 373875. https://doi.org/10.1155/2011/373875

Categories

programming, library