cpc

Description

cpc website

Coding Potential Calculator distinguishes protein-coding from non-coding RNAs based on the sequence features of the input transcripts. Last version of CPC1 is widely used by worldwide researchers. For better serve for scientific community, we update CPC1 to CPC2. It can discriminate the coding and non-coding transcripts faster and more accurately. We provide an online version of CPC2 here.

Environment Modules

Run module spider cpc to find out what environment modules are available for this application.

Environment Variables

• HPC_CPC2_DIR - installation directory
• HPC_CPC2_BIN - executable directory
• HPC_CPC2_DAT - data directory

Categories

phylogenetics