Consed

Description

consed website

The programs Phrap, Cross_match, Phred, and Swat are the leading programs for base calling, sequence comparisons, and sequence assembly. Phred, Cross_match, and Phrap are currently used in many large-scale DNA sequencing and mutation detection projects in academic and biotech settings. Phred is a base calling program for DNA sequence traces. * CONSED_HOME - consed home directory

Environment Modules

Run module spider consed to find out what environment modules are available for this application.

Environment Variables

• HPC_CONSED_DIR - installation directory
• HPC_CONSED_BIN - executable directory
• HPC_CONSED_EX - examples directory

Categories

biology, genomics