COLABFOLD¶

Description¶

ColabFold is an open-source tool that accelerates protein structure and complex prediction by combining the fast homology search of MMseqs2 with AI models like AlphaFold2. It allows researchers to predict protein folding up to 60 times faster than standard implementations without needing expensive hardware, directly within a browser using Google Colaboratory.

Environment Modules¶

Run module spider colabfold to find out what environment modules are available for this application.

Environment Variables¶

HPC_COLABFOLD_DIR - installation directory
HPC_COLABFOLD_BIN - executable directory
COLABFOLD_DB - database directory

Categories¶

biology, protein