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CNVkit

Description

cnvkit website

A command-line toolkit and Python library for detecting copy number variants and alterations genome-wide from high-throughput sequencing.

Environment Modules

Run module spider cnvkit to find out what environment modules are available for this application.

Environment Variables

  • HPC_CNVKIT_DIR - installation directory
  • HPC_CNVKIT_BIN - executable directory

Categories

phylogenetics