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CLARK

Description

clark website

CLARK: fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers.

Environment Modules

Run module spider clark to find out what environment modules are available for this application.

Environment Variables

  • HPC_CLARK_DIR - installation directory
  • HPC_CLARK_BIN - executable directory
  • HPC_CLARK_DOC - documentation directory
  • HPC_CLARK_DBD - database directory

Citation

If you publish research that uses clark you have to cite it as follows:

Ounit R, Wanamaker S, Close TJ, Lonardi S, CLARK: fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers BMC Genomics 2015, 16:236.

Categories

biology, genomics