CLARK¶
Description¶
CLARK: fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers.
Environment Modules¶
Run module spider clark to find out what environment modules are available for this application.
Environment Variables¶
- HPC_CLARK_DIR - installation directory
- HPC_CLARK_BIN - executable directory
- HPC_CLARK_DOC - documentation directory
- HPC_CLARK_DBD - database directory
Citation¶
If you publish research that uses clark you have to cite it as follows:
Ounit, R., Wanamaker, S., Close, T. J., & Lonardi, S. (2015). CLARK: Fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers. BMC Genomics, 16, 236. https://doi.org/10.1186/s12864-015-1419-2
Categories¶
biology, genomics