Circleator¶
Description¶
The Charm City Circleator--or Circleator for short--is a Perl-based visualization tool developed at the Institute for Genome Sciences in the University of Maryland's School of Medicine. Circleator produces circular plots of genome-associated data, like this one:
Environment Modules¶
Run module spider circleator to find out what environment modules are available for this application.
Environment Variables¶
- HPC_CIRCLEATOR_DIR - installation directory
- HPC_CIRCLEATOR_BIN - executable directory
- HPC_CIRCLEATOR_DOC - documentation directory
- HPC_CIRCLEATOR_CONF - config directory
Citation¶
If you publish research that uses circleator you have to cite it as follows:
Crabtree, J., Agrawal, S., Mahurkar, A., Myers, G. S., Rasko, D. A., & White, O. (2014). Circleator: Flexible circular visualization of genome-associated data with BioPerl and SVG. Bioinformatics, 30(21), 3125–3127. https://doi.org/10.1093/bioinformatics/btu505
Categories¶
phylogenetics