Circlator¶
Description¶
Circlator will attempt to identify each circular sequence and output a linearised version of it. It does this by assembling all reads that map to contig ends and comparing the resulting contigs with the input assembly.
Environment Modules¶
Run module spider circlator to find out what environment modules are available for this application.
Environment Variables¶
- HPC_CIRCLATOR_DIR - installation directory
- HPC_CIRCLATOR_BIN - executable directory
Citation¶
If you publish research that uses circlator you have to cite it as follows:
Categories¶
phylogenetics