cfeintact

Description

cfeintact website

CFEIntact is BCCfE's version of HIVIntact, an automated proviral intactness checker for HIV-1 consensus sequences, developed in Python. It enables researchers and clinicians to analyze HIV-1 sequences for intactness, aiding in the understanding of viral replication and persistence.

• Automated Analysis: Simplifies the process of checking HIV-1 consensus sequences for intactness with automated tools. * Extensible: Designed to be extendable with additional checks and features as the field of HIV research evolves. * Free software: Encourages contributions and improvements from the community to make the tool more accurate and robust.

Environment Modules

Run module spider cfeintact to find out what environment modules are available for this application.

Environment Variables

• HPC_CFEINTACT_IMAGE - container image path

Categories

biology, genetics