Citation

If you publish research that uses CellProfiler you have to cite it as follows:

• Carpenter, A. E., Jones, T. R., Lamprecht, M. R., Clarke, C., Kang, I. H., Friman, O., Guertin, D. A., Chang, J. H., Lindquist, R. A., Moffat, J., Golland, P., & Sabatini, D. M. (2006). CellProfiler: Image analysis software for identifying and quantifying cell phenotypes. Genome Biology, 7(10), R100. https://doi.org/10.1186/gb-2006-7-10-r100

• Lamprecht, M. R., Sabatini, D. M., & Carpenter, A. E. (2007). CellProfiler: Free, versatile software for automated biological image analysis. Biotechniques, 42(1), 71–75. https://doi.org/10.2144/000112257

• Jones, T. R., Carpenter, A. E., Lamprecht, M. R., Moffat, J., Silver, S., Grenier, J., Root, D. E., Golland, P., & Sabatini, D. M. (2009). Scoring diverse cellular morphologies in image-based screens with iterative feedback and machine learning. Proceedings of the National Academy of Sciences, 106(6), 1826–1831. https://doi.org/10.1073/pnas.0808843106

• Jones, T. R., Kang, I. H., Wheeler, D. B., Lindquist, R. A., Papallo, A., Sabatini, D. M., Golland, P., & Carpenter, A. E. (2008). CellProfiler Analyst: Data exploration and analysis software for complex image-based screens. BMC Bioinformatics, 9, 482. https://doi.org/10.1186/1471-2105-9-482