celescope¶

Description¶

CeleScope is a collection of bioinfomatics analysis pipelines to process single cell sequencing data generated with Singleron products. These pipelines take paired-end FASTQ files as input and generate output files which can be used for downstream data analysis as well as a summary of QC criteria.

Environment Modules¶

Run module spider celescope to find out what environment modules are available for this application.

Environment Variables¶

HPC_CELESCOPE_DIR - installation directory
HPC_CELESCOPE_BIN - executable directory

Categories¶

biology, sequencing, genomics