Usage

When running Canu you should specify Memory and CPU arguments that match the requested resources in your command. e.g.

#SBATCH --cpus-per-task=8 
#SBATCH --mem=10g

-maxThreads=8
-maxMemory=10g

If your canu jobs run out of memory make sure to set scheduled job resources in gridOptions and merylMemory respectively to make sure meryl does not exceed the requested memory. See the Canu Parameter Reference Page for more detailed information..