BRM

Description

brm website

BRM is a method of BSA-seq for mapping QTLs or major genes. It can apply to different populations including recombinant inbred lines (RIL), doubled haploid (DH), haploid (H), F2 , F3, and so on.

Environment Modules

Run module spider brm to find out what environment modules are available for this application.

Environment Variables

• HPC_BRM_DIR - installation directory
• HPC_BRM_BIN - executable directory
• HPC_BRM_DOC - documentation directory
• HPC_BRM_EXE - examples directory
• HPC_BRM_SCP - tools directory
• HPC_BRM_CONFEXE - configure examples directory

Citation

If you publish research that uses BRM you have to cite it as follows:

Huang L, Tang W, Bu S, et al. BRM: A statistical method for QTL mapping based on bulked segregant analysis by deep sequencing. Bioinformatics, 2019.

Categories

phylogenetics