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BRM

Description

brm website

BRM is a method of BSA-seq for mapping QTLs or major genes. It can apply to different populations including recombinant inbred lines (RIL), doubled haploid (DH), haploid (H), F2 , F3, and so on.

Environment Modules

Run module spider brm to find out what environment modules are available for this application.

Environment Variables

  • HPC_BRM_DIR - installation directory
  • HPC_BRM_BIN - executable directory
  • HPC_BRM_DOC - documentation directory
  • HPC_BRM_EXE - examples directory
  • HPC_BRM_SCP - tools directory
  • HPC_BRM_CONFEXE - configure examples directory

Citation

If you publish research that uses BRM you have to cite it as follows:

Huang, L., Tang, W., Bu, S., et al. (2020). BRM: A statistical method for QTL mapping based on bulked segregant analysis by deep sequencing. Bioinformatics, 36(7), 2150–2156. https://doi.org/10.1093/bioinformatics/btz874

Categories

phylogenetics