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BPP

Description

bpp website

This module initializes your environment for the use of the BPP software. The program BP&P implements the Bayesian methods of Yang (2002), Rannala & Yang (2003), Burgess & Yang (2008), and Yang & Rannala (2010), for estimating population sizes (theta), species divergence times (tau), and for delimiting species using multi-locus sequence data from several closely related species.

Environment Modules

Run module spider bpp to find out what environment modules are available for this application.

Environment Variables

  • HPC_BPP_DIR - main directory
  • HPC_BPP_BIN - executable directory
  • HPC_BPP_CTL - control file examples directory
  • HPC_BPP_EX - tutorial examples directory

Additional Usage Information

Note

Sample '.ctl' files are in the '$HPC_BPP_CTL' directory. You need to copy one of them to your current working directory and modify it before running bpp.

Categories

biology, phylogenetics