BloomTree¶
Description¶
The Sequence Bloom Tree (SBT) is a method that will allow you to index a set of short-read sequencing experiments and then query them quickly for a given sequence. The code base provided here is an implementation of SBT written in C++ and is open source.
Environment Modules¶
Run module spider bloomtree to find out what environment modules are available for this application.
Environment Variables¶
- HPC_BLOOMTREE_DIR - installation directory
- HPC_BLOOMTREE_BIN - executables directory
Citation¶
If you publish research that uses Bloomtree you have to cite it as follows:
Categories¶
data_mining