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bgenix

Description

bgenix website

Bgenix is a reference implementation of the BGEN format, written in C++. The library can be used as the basis for BGEN support in other software, or as a reference for developers writing their own implementations of the BGEN format.

Environment Modules

Run module spider bgenix to find out what environment modules are available for this application.

Environment Variables

  • HPC_BGENIX_DIR - installation directory
  • HPC_BGENIX_BIN - executable directory

Citation

If you publish research that uses bgenix you have to cite it as follows:

Band, G., & Marchini, J. (2018). BGEN: A binary file format for imputed genotype and haplotype data. bioRxiv, 308296. https://doi.org/10.1101/308296

Categories

data_science, genomics