bcftools¶

Description¶

BCFtools are meant as a faster replacement for most of the perl VCFtools commands. This package contains all the vcf* commands which previously lived in the htslib repository (such as vcfcheck, vcfmerge, vcfisec, etc.) and the

Environment Modules¶

Run module spider bcftools to find out what environment modules are available for this application.

Environment Variables¶

samtools BCF calling from bcftools subdirectory of samtools. * HPC_BCFTOOLS_DIR - installation directory * HPC_BCFTOOLS_BIN - executable directory

Categories¶

biology, ngs